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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12682343_12682994_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12682343 - 12682994

Intron Length:

652

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTTGATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

GCCTCTTTGATC

Flanking Amino Acid:

ALRTIQVRQRGSITPRIRTP

Intron Amino Acid Position:

663

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

81.3

32.8

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

72.6

0.51

Minor 5ss

-2.4

3.2

40.6

45.6

Minor BPS

61.6

0.35

1.2

61.42

Associated Gene:

Gene:

CUX2

Ensembl Gene ID:

ENSAPLG00000004382

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004516

12664077 - 12688732

24656