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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12683097_12684401_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12683097 - 12684401

Intron Length:

1305

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CCCCCCTCACTC

Flanking Amino Acid:

AKKEIESQKGGEPKNPSASQ

Intron Amino Acid Position:

697

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.5

33.5

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

89.9

0.9

0.6

84.8

22.8

Minor 5ss

-1.6

3.2

49.9

46.5

Minor BPS

44.6

-0.4

1.8

47.19

42.9

Associated Gene:

Gene:

CUX2

Ensembl Gene ID:

ENSAPLG00000004382

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004516

12664077 - 12688732

24656