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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12685178_12685416_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12685178 - 12685416

Intron Length:

239

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCAGCC

5'SS Class:

major

3'SS Sequence:

GTGCCGTGCCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTATAAC

U12 Branch Point Sequence:

TCGGGTATAACC

Flanking Amino Acid:

GICQRIFGEKVLGLSQGSVS

Intron Amino Acid Position:

956

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.6

0.39

1.2

60.1

40.3

Major BPS

60.2

0.25

1.3

39.8

Major PPT

0.2

1.1

49.5

43.8

Minor 5ss

35.8

-1.6

3.6

51.1

45.6

Minor BPS

44.7

-0.4

2.1

54.14

44.4

Associated Gene:

Gene:

CUX2

Ensembl Gene ID:

ENSAPLG00000004382

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004516

12664077 - 12688732

24656