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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12686489_12686622_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12686489 - 12686622

Intron Length:

134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGCGGGCG

5'SS Class:

major

3'SS Sequence:

TCTCCTCCGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTAAC

U12 Branch Point Sequence:

CCCGCGCTAACC

Flanking Amino Acid:

VKEVLTDNNLGQRLFGESIL

Intron Amino Acid Position:

1096

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

57.6

41.5

Major BPS

57.1

0.18

1.1

Major PPT

72.1

0.5

0.9

65.7

Minor 5ss

-3.1

3.4

29.5

43.4

Minor BPS

42.3

-0.6

2.4

50.15

46.7

Associated Gene:

Gene:

CUX2

Ensembl Gene ID:

ENSAPLG00000004382

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004516

12664077 - 12688732

24656