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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12706520_12717779_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12706520 - 12717779

Intron Length:

11260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTCAG

U12 Branch Point Sequence:

CACGGCTCAGCC

Flanking Amino Acid:

YVLELFDPPKGSKPKLHTAC

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

45.3

-0.3

1.7

51.1

46.3

Major PPT

81.1

0.7

76.6

25.4

Minor 5ss

35.3

-1.7

3.4

50.1

46.5

Minor BPS

39.3

-0.8

2.1

43.14

44.3

Associated Gene:

Gene:

SH2B3

Ensembl Gene ID:

ENSAPLG00000031069

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041374

12705737 - 12719942

14206