Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_12717882_12718132_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12717882 - 12718132

Intron Length:

251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGCCC

5'SS Class:

major

3'SS Sequence:

TGGTGTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

CCTCTCTAATGT

Flanking Amino Acid:

PDNLHTFVLKVTNATDVLFE

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

63.1

39.8

Major BPS

82.2

0.8

0.9

81.6

Major PPT

68.1

0.41

58.5

43.1

Minor 5ss

30.9

-2.2

3.4

42.7

44.4

Minor BPS

41.9

-0.5

2.1

55.81

46.8

Associated Gene:

Gene:

SH2B3

Ensembl Gene ID:

ENSAPLG00000031069

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041374

12705737 - 12719942

14206