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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12745106_12745589_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12745106 - 12745589

Intron Length:

484

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTGAGTAAC

5'SS Class:

major

3'SS Sequence:

TCTTCATGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TAATGTTGAACA

Flanking Amino Acid:

EDKEEKKDTSEQVRKSTLNP

Intron Amino Acid Position:

668

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

71.2

34.5

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

75.1

0.56

0.9

73.9

35.7

Minor 5ss

31.9

-2.1

2.7

33.2

35.4

Minor BPS

53.6

0.11

1.9

66.38

39.7

Associated Gene:

Gene:

ATXN2

Ensembl Gene ID:

ENSAPLG00000008724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009136

12725146 - 12768535

43390