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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12804837_12805274_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12804837 - 12805274

Intron Length:

438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCCTG

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCGCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACCCAT

U12 Branch Point Sequence:

GCGTGCATAACC

Flanking Amino Acid:

LPLDQQHFDVVVEAHQEGKC

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.4

Major BPS

55.7

0.14

1.2

64.4

33.7

Major PPT

71.5

0.48

0.9

64.7

36.6

Minor 5ss

41.6

-0.9

3.1

53.5

44.6

Minor BPS

48.9

-0.1

2.1

59.81

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008641

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008980

12802995 - 12811412

8418