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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12806744_12806803_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12806744 - 12806803

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTCAGCAGA

5'SS Class:

weak_major

3'SS Sequence:

CTGACTGGCACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCTGAC

U12 Branch Point Sequence:

TGCCAGCTGACT

Flanking Amino Acid:

PDGQLPPGPATAVPNQLAVP

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.4

0.08

1.4

53.2

45.5

Major BPS

57.5

0.19

1.1

48.8

38.1

Major PPT

0.2

1.1

52.4

41.5

Minor 5ss

37.1

-1.5

2.9

50.5

45.5

Minor BPS

40.2

-0.6

2.4

59.51

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008641

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008980

12802995 - 12811412

8418