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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12810347_12810942_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12810347 - 12810942

Intron Length:

596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTCTGAA

5'SS Class:

weak_major

3'SS Sequence:

CCAGAGCACGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGGTGAA

U12 Branch Point Sequence:

CCGCCCAGAGCA

Flanking Amino Acid:

EPNHAAQFCAEFVADLAWDF

Intron Amino Acid Position:

572

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.7

0.23

1.4

61.2

39.7

Major BPS

49.2

-0

1.3

40.8

41.4

Major PPT

51.3

0.03

42.7

37.1

Minor 5ss

-1.2

49.5

46.8

Minor BPS

41.4

-0.6

1.9

46.66

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008641

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008980

12802995 - 12811412

8418