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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12818795_12819292_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12818795 - 12819292

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTGAT

U12 Branch Point Sequence:

ATTTACGGAAGG

Flanking Amino Acid:

ALYVANLIKEAGFPPGVVNI

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

74.4

30.8

Major BPS

71.5

0.53

1.1

43.2

Major PPT

78.6

0.64

0.7

72.5

25.7

Minor 5ss

23.1

-3.1

3.2

Minor BPS

42.5

-0.7

2.4

55.68

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008975

12816761 - 12823338

6578