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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12819407_12819774_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12819407 - 12819774

Intron Length:

368

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAT

U12 Branch Point Sequence:

CAGTCCCTAATG

Flanking Amino Acid:

DKVAFTGSTEVGHLIQKAAA

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

67.8

43.5

Major BPS

69.6

0.49

1.1

69.5

Major PPT

78.6

0.64

0.8

72.8

Minor 5ss

28.6

-2.5

3.5

37.8

47.1

Minor BPS

54.6

0.01

1.8

57.08

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008975

12816761 - 12823338

6578