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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12820735_12821089_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12820735 - 12821089

Intron Length:

355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CGATGGCTCTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

CCGAGCTGATCT

Flanking Amino Acid:

FDFKTEQGPQVDEEQYKKIL

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.8

73.9

29.7

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

58.8

0.2

54.3

41.2

Minor 5ss

25.3

-2.8

3.1

30.4

42.9

Minor BPS

41.4

-0.5

2.1

52.92

47.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008975

12816761 - 12823338

6578