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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12839403_12840885_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12839403 - 12840885

Intron Length:

1483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTGCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTGAT

U12 Branch Point Sequence:

GCGCCCCAAAGT

Flanking Amino Acid:

TSPTPYTYNKSCDLWSLGVI

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

78.8

38.3

Major BPS

64.7

0.36

1.2

55.1

42.1

Major PPT

0.74

0.8

80.2

31.8

Minor 5ss

45.6

-0.5

2.9

46.2

Minor BPS

41.4

-0.5

2.1

54.53

46.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008907

12834604 - 12846233

11630