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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12844173_12844816_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12844173 - 12844816

Intron Length:

644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAACTCTC

5'SS Class:

major

3'SS Sequence:

TGTTCTTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

CCAATTGTAATT

Flanking Amino Acid:

NPILRKRKLLGTKPKDGVYI

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.2

67.1

44.6

Major BPS

84.4

0.85

1.1

34.5

Major PPT

86.2

0.82

0.7

81.2

30.8

Minor 5ss

43.9

-0.7

2.9

53.9

43.3

Minor BPS

44.7

-0.3

1.9

55.87

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008907

12834604 - 12846233

11630