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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12844939_12845311_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12844939 - 12845311

Intron Length:

373

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGCCACT

5'SS Class:

weak_major

3'SS Sequence:

TTCTCCTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTCAT

U12 Branch Point Sequence:

TTCTCCTAAACA

Flanking Amino Acid:

AQCILPQAGKGENEDEKLNE

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.4

0.13

1.4

58.3

46.2

Major BPS

72.4

0.56

1.2

39.9

Major PPT

73.5

0.53

0.9

70.1

34.2

Minor 5ss

42.5

-0.8

59.3

44.9

Minor BPS

75.2

0.79

1.6

83.03

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008907

12834604 - 12846233

11630