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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12857243_12857769_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12857243 - 12857769

Intron Length:

527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTCT

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

CAGCCCTGATCT

Flanking Amino Acid:

KIYMALLILQALTAASQGLL

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.5

34.8

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

77.2

0.61

0.8

Minor 5ss

38.7

-1.3

3.4

56.7

47.6

Minor BPS

48.9

-0

1.8

63.72

45.9

Associated Gene:

Gene:

TMEM116

Ensembl Gene ID:

ENSAPLG00000008542

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008881

12857042 - 12867827

10786