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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12860989_12864437_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12860989 - 12864437

Intron Length:

3449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCGAAA

U12 Branch Point Sequence:

TTGTCCGAAATC

Flanking Amino Acid:

ICYNLQATGQVFYVASFLYT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

35.1

Major BPS

49.1

-0

1.4

57.8

37.4

Major PPT

79.1

0.66

0.9

77.2

37.1

Minor 5ss

32.3

-2

2.7

37.1

33.8

Minor BPS

50.9

0.01

2.3

69.56

42.8

Associated Gene:

Gene:

TMEM116

Ensembl Gene ID:

ENSAPLG00000008542

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008881

12857042 - 12867827

10786