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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12864570_12867611_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12864570 - 12867611

Intron Length:

3042

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGACG

5'SS Class:

strong_major

3'SS Sequence:

TTCATTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

ACTGATTTCATT

Flanking Amino Acid:

VFQNAVRSPEVRPLFYLSLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

76.1

39.5

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

80.2

0.68

0.8

72.9

37.3

Minor 5ss

32.6

-2

3.1

40.4

45.5

Minor BPS

45.8

-0.2

1.9

62.25

42.8

Associated Gene:

Gene:

TMEM116

Ensembl Gene ID:

ENSAPLG00000008542

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008881

12857042 - 12867827

10786