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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12912217_12913210_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12912217 - 12913210

Intron Length:

994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGGTGCA

5'SS Class:

major

3'SS Sequence:

TTTCTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TGAAGAATAATC

Flanking Amino Acid:

VEKSLLEDHEASACPLRPVV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.2

67.1

38.4

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

92.2

0.95

0.5

92.5

17.5

Minor 5ss

27.9

-2.5

3.1

33.2

41.8

Minor BPS

41.1

-0.7

2.1

51.34

Associated Gene:

Gene:

TRAFD1

Ensembl Gene ID:

ENSAPLG00000008457

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008779

12910863 - 12918776

7914

ENSAPLT00000001638

12910863 - 12919049

8187