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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12915201_12916019_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12915201 - 12916019

Intron Length:

819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

CCTTACTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAC

U12 Branch Point Sequence:

CTGTCCTTACTT

Flanking Amino Acid:

LSLSTSNHIKSDEIMLPCEF

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

89.9

22.1

Major BPS

69.1

0.48

32.1

Major PPT

82.6

0.73

0.8

76.4

31.8

Minor 5ss

-1

2.8

51.7

39.1

Minor BPS

67.4

0.63

1.7

79.19

43.7

Associated Gene:

Gene:

TRAFD1

Ensembl Gene ID:

ENSAPLG00000008457

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008779

12910863 - 12918776

7914

ENSAPLT00000001638

12910863 - 12919049

8187