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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12916091_12916287_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12916091 - 12916287

Intron Length:

197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTAGTAC

5'SS Class:

major

3'SS Sequence:

AATTGCCTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTGTTTTAATT

Flanking Amino Acid:

YPAEDLILHQTGCNPASAFA

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

61.2

33.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

66.5

0.37

59.5

40.9

Minor 5ss

-1.5

3.3

48.7

47.8

Minor BPS

0.64

1.3

78.3

39.3

Associated Gene:

Gene:

TRAFD1

Ensembl Gene ID:

ENSAPLG00000008457

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008779

12910863 - 12918776

7914

ENSAPLT00000001638

12910863 - 12919049

8187