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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12917573_12917867_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12917573 - 12917867

Intron Length:

295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGGGCA

5'SS Class:

major

3'SS Sequence:

GGTGTCCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TGTTCCTGAATT

Flanking Amino Acid:

ELVRRRIRHQGDVSPRSIEG

Intron Amino Acid Position:

447

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

64.5

35.1

Major BPS

0.62

1.4

85.7

34.9

Major PPT

74.9

0.56

41.4

Minor 5ss

30.1

-2.3

3.4

38.3

46.9

Minor BPS

78.2

0.96

1.3

90.07

33.6

Associated Gene:

Gene:

TRAFD1

Ensembl Gene ID:

ENSAPLG00000008457

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008779

12910863 - 12918776

7914

ENSAPLT00000001638

12910863 - 12919049

8187