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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12918178_12918562_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12918178 - 12918562

Intron Length:

385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGCCT

5'SS Class:

major

3'SS Sequence:

TCTTCCTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAA

U12 Branch Point Sequence:

TTTGTCTGAAAG

Flanking Amino Acid:

GFSGASPTRRSFRNEGGRNL

Intron Amino Acid Position:

550

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.2

44.2

Major BPS

64.4

0.36

1.2

57.3

41.7

Major PPT

86.2

0.81

0.7

24.1

Minor 5ss

38.9

-1.2

3.4

57.5

46.7

Minor BPS

55.6

0.04

1.7

65.14

42.5

Associated Gene:

Gene:

TRAFD1

Ensembl Gene ID:

ENSAPLG00000008457

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008779

12910863 - 12918776

7914

ENSAPLT00000001638

12910863 - 12919049

8187