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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12926616_12927034_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12926616 - 12927034

Intron Length:

419

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTGTGGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTCAT

U12 Branch Point Sequence:

TCATCGGGTACT

Flanking Amino Acid:

TYNYVKKFENINDETELEAL

Intron Amino Acid Position:

4184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

34.8

Major BPS

69.7

0.49

1.3

71.4

45.1

Major PPT

74.4

0.55

72.9

37.4

Minor 5ss

43.5

-0.7

62.3

42.4

Minor BPS

38.4

-0.8

2.8

61.22

Associated Gene:

Gene:

HECTD4

Ensembl Gene ID:

ENSAPLG00000015991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016725

12924158 - 12990491

66334