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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12927257_12927551_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12927257 - 12927551

Intron Length:

295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGGTGT

5'SS Class:

major

3'SS Sequence:

TTTTTTCCTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTCCTAAAG

Flanking Amino Acid:

CPSSAVNKNKGKYILTPSPI

Intron Amino Acid Position:

4110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

68.2

39.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.7

0.71

0.9

83.3

25.8

Minor 5ss

39.1

-1.2

3.3

55.4

48.8

Minor BPS

62.3

0.25

1.8

73.24

38.9

Associated Gene:

Gene:

HECTD4

Ensembl Gene ID:

ENSAPLG00000015991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016725

12924158 - 12990491

66334