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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12940816_12941435_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12940816 - 12941435

Intron Length:

620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGGCTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAC

U12 Branch Point Sequence:

TTCTGTCTACCA

Flanking Amino Acid:

LDQIKGALQLGMVDIARQTV

Intron Amino Acid Position:

2717

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

71.4

40.1

Major BPS

61.3

0.28

30.6

Major PPT

0.61

0.9

70.3

40.1

Minor 5ss

40.4

-1.1

3.3

55.6

48.6

Minor BPS

45.4

-0.3

2.2

63.12

43.7

Associated Gene:

Gene:

HECTD4

Ensembl Gene ID:

ENSAPLG00000015991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016725

12924158 - 12990491

66334