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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12942403_12942992_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12942403 - 12942992

Intron Length:

590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CATCTTGTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AATTCTTTACCT

Flanking Amino Acid:

MWPVVHIQKKNTKVRANFGS

Intron Amino Acid Position:

2550

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.7

0.62

0.9

68.8

41.6

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

70.4

0.72

1.6

83.43

37.5

Associated Gene:

Gene:

HECTD4

Ensembl Gene ID:

ENSAPLG00000015991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016725

12924158 - 12990491

66334