Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_12943363_12943633_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12943363 - 12943633

Intron Length:

271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTATGTTAG

5'SS Class:

major

3'SS Sequence:

TATTAATTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTTGTATTAATT

Flanking Amino Acid:

TNPVGTCLFHNNGRAVHYNG

Intron Amino Acid Position:

2468

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

70.4

36.4

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

77.7

0.62

0.9

74.9

39.4

Minor 5ss

47.3

-0.3

2.4

57.5

41.6

Minor BPS

66.3

0.59

1.7

84.39

36.6

Associated Gene:

Gene:

HECTD4

Ensembl Gene ID:

ENSAPLG00000015991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016725

12924158 - 12990491

66334