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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12946758_12947305_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12946758 - 12947305

Intron Length:

548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATTAT

U12 Branch Point Sequence:

AAGTCATTATCT

Flanking Amino Acid:

AQIWTTTAEKVLSRALMYIP

Intron Amino Acid Position:

2117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

33.6

Major BPS

72.1

0.55

1.1

62.3

43.7

Major PPT

83.3

0.75

0.8

80.6

31.4

Minor 5ss

40.4

-1.1

2.9

48.9

41.5

Minor BPS

0.27

1.9

73.13

43.2

Associated Gene:

Gene:

HECTD4

Ensembl Gene ID:

ENSAPLG00000015991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016725

12924158 - 12990491

66334