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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12954790_12954946_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12954790 - 12954946

Intron Length:

157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

CTATTAACCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TCTTGCTTAATC

Flanking Amino Acid:

RARPQFRPSIKEVIQPEVME

Intron Amino Acid Position:

1321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.6

33.2

Major BPS

81.9

0.79

0.8

81.9

Major PPT

64.7

0.33

0.9

56.4

38.8

Minor 5ss

39.2

-1.2

2.8

51.8

Minor BPS

70.7

0.63

1.7

77.77

38.8

Associated Gene:

Gene:

HECTD4

Ensembl Gene ID:

ENSAPLG00000015991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016725

12924158 - 12990491

66334