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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12955496_12956166_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12955496 - 12956166

Intron Length:

671

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTCAAA

5'SS Class:

major

3'SS Sequence:

ATTCCTACTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

CTATTCCTACTA

Flanking Amino Acid:

WGFACTVRAQESSEDVSGGL

Intron Amino Acid Position:

528

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

67.2

39.8

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

77.4

0.62

0.9

70.3

34.3

Minor 5ss

37.7

-1.4

3.1

48.8

Minor BPS

47.6

-0.1

1.9

59.96

40.5

Associated Gene:

Gene:

HECTD4

Ensembl Gene ID:

ENSAPLG00000015991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016725

12924158 - 12990491

66334

ENSAPLT00000016606

12954916 - 12967822

12907