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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12956272_12957473_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12956272 - 12957473

Intron Length:

1202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTAT

5'SS Class:

major

3'SS Sequence:

TCAAAATTTTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCAAAA

U12 Branch Point Sequence:

TACCCTTCAAAA

Flanking Amino Acid:

GTGWPKDLVKVEGDTVTFSF

Intron Amino Acid Position:

493

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

69.1

Major BPS

68.1

0.45

73.5

28.6

Major PPT

59.5

0.22

1.2

60.9

43.5

Minor 5ss

36.7

-1.5

3.6

55.1

49.1

Minor BPS

49.9

-0

1.6

59.77

39.6

Associated Gene:

Gene:

HECTD4

Ensembl Gene ID:

ENSAPLG00000015991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016725

12924158 - 12990491

66334

ENSAPLT00000016606

12954916 - 12967822

12907