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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12959210_12960254_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12959210 - 12960254

Intron Length:

1045

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGACTCTT

5'SS Class:

major

3'SS Sequence:

GCTGTTATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

ATTTCAGAAACT

Flanking Amino Acid:

EQKGKLLPDERMLEEKEEPG

Intron Amino Acid Position:

377

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

1.1

77.8

38.7

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

77.4

0.62

0.9

73.7

40.5

Minor 5ss

40.3

-1.1

3.1

58.6

45.9

Minor BPS

48.8

-0

2.5

79.5

42.4

Associated Gene:

Gene:

HECTD4

Ensembl Gene ID:

ENSAPLG00000015991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016725

12924158 - 12990491

66334

ENSAPLT00000016606

12954916 - 12967822

12907