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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12964116_12964734_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12964116 - 12964734

Intron Length:

619

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAATGA

5'SS Class:

strong_major

3'SS Sequence:

TGCATTTTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

CTTTCCTGCATT

Flanking Amino Acid:

RFGSEDDDHYRLNDELLHYI

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

71.1

35.5

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

70.2

0.45

1.1

70.2

39.3

Minor 5ss

36.7

-1.5

3.1

47.8

47.6

Minor BPS

0.4

1.9

80.5

41.8

Associated Gene:

Gene:

HECTD4

Ensembl Gene ID:

ENSAPLG00000015991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016725

12924158 - 12990491

66334

ENSAPLT00000016606

12954916 - 12967822

12907