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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12967283_12967645_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12967283 - 12967645

Intron Length:

363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TAATTTTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

ATGTGTTTAATT

Flanking Amino Acid:

IIRCILVVFQVVFKFFFSPQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

71.5

34.1

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

78.1

0.63

0.8

77.6

36.2

Minor 5ss

28.7

-2.4

3.4

37.9

46.9

Minor BPS

63.6

0.5

1.7

77.6

39.8

Associated Gene:

Gene:

HECTD4

Ensembl Gene ID:

ENSAPLG00000015991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016725

12924158 - 12990491

66334

ENSAPLT00000016606

12954916 - 12967822

12907