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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12968949_12969043_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12968949 - 12969043

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTGTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTCTCAGAAATT

Flanking Amino Acid:

GGTSALSSLKILASSLVFNI

Intron Amino Acid Position:

569

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

71.6

40.1

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

83.9

0.76

0.8

81.4

30.6

Minor 5ss

35.3

-1.7

2.9

41.6

Minor BPS

46.1

-0.2

2.4

72.41

Associated Gene:

Gene:

HECTD4

Ensembl Gene ID:

ENSAPLG00000015991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016725

12924158 - 12990491

66334