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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12980204_12990299_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12980204 - 12990299

Intron Length:

10096

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTAAAT

U12 Branch Point Sequence:

CCTGCCTAAATG

Flanking Amino Acid:

VAEPGDTELEILTFETKNPT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

38.2

Major BPS

57.4

0.18

1.1

64.9

37.3

Major PPT

81.3

0.7

72.6

32.2

Minor 5ss

25.5

-2.8

3.5

37.8

47.1

Minor BPS

49.9

-0.1

1.9

54.08

47.7

Associated Gene:

Gene:

HECTD4

Ensembl Gene ID:

ENSAPLG00000015991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016725

12924158 - 12990491

66334