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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13028255_13031246_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13028255 - 13031246

Intron Length:

2992

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAGTTG

5'SS Class:

major

3'SS Sequence:

TTTTGTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TTTTGTTTCACA

Flanking Amino Acid:

TLQRRIEEEQKSKRKGHEYT

Intron Amino Acid Position:

534

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

65.5

40.9

Major BPS

81.6

0.78

0.8

24.9

Major PPT

0.86

0.7

83.5

31.6

Minor 5ss

45.8

-0.4

3.2

63.6

48.1

Minor BPS

59.4

0.29

2.2

78.6

38.6

Associated Gene:

Gene:

PTPN11

Ensembl Gene ID:

ENSAPLG00000015307

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023387

13015510 - 13032222

16713

ENSAPLT00000016021

13014272 - 13031629

17358