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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13031360_13031559_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13031360 - 13031559

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTTAG

5'SS Class:

major

3'SS Sequence:

TGTTTCATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

ACTTGTTTCATT

Flanking Amino Acid:

PPCTPTPTCPEMREDSARVY

Intron Amino Acid Position:

571

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

68.6

39.1

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

84.9

0.79

0.8

82.2

34.1

Minor 5ss

40.8

-1

2.8

45.7

43.5

Minor BPS

48.6

-0

2.1

69.15

Associated Gene:

Gene:

PTPN11

Ensembl Gene ID:

ENSAPLG00000015307

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023387

13015510 - 13032222

16713

ENSAPLT00000016021

13014272 - 13031629

17358