Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_13155630_13156006_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13155630 - 13156006

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

AACTACATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTACAT

U12 Branch Point Sequence:

CACACACTAACT

Flanking Amino Acid:

LATEWVKGKTVDEALKIKNT

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

67.3

36.7

Major BPS

61.4

0.28

1.1

36.5

Major PPT

68.9

0.43

63.5

41.6

Minor 5ss

32.2

-2

3.4

43.3

Minor BPS

47.3

-0.1

64.1

45.4

Associated Gene:

Gene:

ISCU

Ensembl Gene ID:

ENSAPLG00000006183

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006400

13154506 - 13156562

2057