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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13219098_13220049_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13219098 - 13220049

Intron Length:

952

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCGA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

CTGTTCTCACTC

Flanking Amino Acid:

LLEYEGILDASKQRHNKLWK

Intron Amino Acid Position:

449

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

0.87

0.8

85.6

Major PPT

77.4

0.62

0.7

69.3

31.4

Minor 5ss

30.1

-2.3

3.2

38.9

46.2

Minor BPS

47.9

-0.1

1.8

57.29

42.4

Associated Gene:

Gene:

SSH1

Ensembl Gene ID:

ENSAPLG00000005232

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005403

13216746 - 13246319

29574