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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13223617_13224614_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13223617 - 13224614

Intron Length:

998

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATCTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATGAT

U12 Branch Point Sequence:

ATGATTCTAGGT

Flanking Amino Acid:

KDLENVTSKEIRNELEKHMN

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

80.4

34.2

Major BPS

63.3

0.33

1.1

53.7

41.6

Major PPT

82.8

0.74

0.8

77.1

31.6

Minor 5ss

37.2

-1.5

3.1

49.8

46.4

Minor BPS

40.1

-0.6

1.9

54.92

41.3

Associated Gene:

Gene:

SSH1

Ensembl Gene ID:

ENSAPLG00000005232

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005403

13216746 - 13246319

29574