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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13263426_13264899_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13263426 - 13264899

Intron Length:

1474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCCAA

U12 Branch Point Sequence:

CTGTTCCCAACA

Flanking Amino Acid:

LLWTTLSEFPGVLVTLWIID

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

72.3

37.7

Major BPS

63.1

0.33

1.2

72.7

34.3

Major PPT

85.4

0.8

0.7

80.4

24.8

Minor 5ss

33.2

-1.9

3.2

40.6

40.8

Minor BPS

49.5

-0

1.9

63.73

42.7

Associated Gene:

Gene:

SVOP

Ensembl Gene ID:

ENSAPLG00000004265

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004386

13260999 - 13280061

19063