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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13276530_13280026_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13276530 - 13280026

Intron Length:

3497

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

TCTGTGTTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TAATCCTCATTT

Flanking Amino Acid:

EDDLFQLRQLPVVKFRRTGE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.3

67.4

Major BPS

84.4

0.85

34.5

Major PPT

78.8

0.65

0.9

76.2

37.8

Minor 5ss

37.9

-1.4

2.7

50.5

39.2

Minor BPS

57.2

0.3

1.8

74.69

41.9

Associated Gene:

Gene:

SVOP

Ensembl Gene ID:

ENSAPLG00000004265

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004386

13260999 - 13280061

19063