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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13315929_13316006_F


Intron Information:

Intron Rank:
24

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
13315929 - 13316006

Intron Length:
78

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTCAGTGAG

5'SS Class:
major

3'SS Sequence:
TTTCCTCTTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCCCCAT

U12 Branch Point Sequence:
CTGTCCCCATCC

Flanking Amino Acid:
HSKVALRARQVLIASHLPSY

Intron Amino Acid Position:
921

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.9
0.7
1.3
72.3
39.5

Major BPS
59.7
0.24
1.3
68.6
38.9

Major PPT
89.6
0.89
0.6
84.7
22.9

Minor 5ss
27.4
-2.6
2.9
31.5
42.8

Minor BPS
45.7
-0.3
2.1
59.24
45.6

Associated Gene:

Gene:
ACACB

Ensembl Gene ID:

Chromosome:
16

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

13303393 - 13325895
22503

13305413 - 13325895
20483