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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13317941_13318020_F


Intron Information:

Intron Rank:
32

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
13317941 - 13318020

Intron Length:
80

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAGGAGCT

5'SS Class:
strong_major

3'SS Sequence:
TCCCCGTTCCCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCTTGAC

U12 Branch Point Sequence:
TGGCCCTTGACT

Flanking Amino Acid:
KFFTFRARDEFAEDRIYRHL

Intron Amino Acid Position:
1177

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.7
0.75
1
72.5
37.3

Major BPS
61.6
0.29
1.1
54.6
40.8

Major PPT
72.7
0.51
0.8
63.9
36.7

Minor 5ss
31.7
-2.1
3.6
47.8
47.9

Minor BPS
73.8
0.83
1.2
81.88
39.4

Associated Gene:

Gene:
ACACB

Ensembl Gene ID:

Chromosome:
16

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

13303393 - 13325895
22503

13305413 - 13325895
20483