Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_13318237_13318366_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13318237 - 13318366

Intron Length:

130

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGGCGG

5'SS Class:

strong_major

3'SS Sequence:

TCGCGTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAG

U12 Branch Point Sequence:

GCCTCCTGAGAG

Flanking Amino Acid:

IVRHSDLITKEASFEYLQNE

Intron Amino Acid Position:

1249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.8

41.7

Major BPS

54.8

0.12

1.6

53.3

44.2

Major PPT

68.4

0.41

61.2

40.1

Minor 5ss

19.8

-3.5

3.8

29.5

43.3

Minor BPS

45.4

-0.4

1.9

46.39

45.7

Associated Gene:

Gene:

ACACB

Ensembl Gene ID:

ENSAPLG00000015224

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046874

13303393 - 13325895

22503

ENSAPLT00000015957

13305413 - 13325895

20483