Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_13412782_13413304_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13412782 - 13413304

Intron Length:

523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCGGTTTA

5'SS Class:

major

3'SS Sequence:

TTTAACCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

ACTGCTTTAACC

Flanking Amino Acid:

TSTWKILRGKGETLRPAMNH

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.3

38.1

Major BPS

81.8

0.79

1.1

34.5

Major PPT

71.1

0.48

66.4

40.2

Minor 5ss

37.8

-1.4

3.1

49.5

46.8

Minor BPS

70.2

0.61

1.4

72.1

39.6

Associated Gene:

Gene:

UBE3B

Ensembl Gene ID:

ENSAPLG00000004427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004609

13410079 - 13427904

17826