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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13420116_13420502_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13420116 - 13420502

Intron Length:

387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTTGTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

GGTCTCTGAATC

Flanking Amino Acid:

RFAPEDHWLRKDLKPSVLFQ

Intron Amino Acid Position:

621

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

78.5

28.9

Major BPS

0.52

1.5

79.6

35.6

Major PPT

67.7

0.4

1.1

74.4

34.1

Minor 5ss

33.5

-1.9

3.3

43.7

38.1

Minor BPS

55.9

0.16

1.4

62.32

36.5

Associated Gene:

Gene:

UBE3B

Ensembl Gene ID:

ENSAPLG00000004427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004609

13410079 - 13427904

17826